Genome sc|0005622

Genomics

Accession

NCBI Assembly:GCA_001189275.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 100.0%
• Contamination: 3.8%
• Quality: 81.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 17 amino acids

Sequencing depth

47.0 ×

Source

• BioSample: SAMN02999931

Other features

• G+C Content: 58.0%
• Coding Density: 89.18%
• Codon Table: 11
• N50: 1,993,257 bp
• Contigs: 1
• Largest Contig: 1,993,257 bp
• Assembly Length: 1,993,257 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

This is a complete, closed genome

Automated checks

Complete

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Last modified 20 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN02999931

Date

Collection Date: 2006-08

Location

Lat Lon: 44° 44′ 21″ N, 110° 19′ 28″ W

View map of sampling locations

Toponym

Geo Loc Name: USA: Joseph's Coat Hot Spring, Yellowstone National Park

Environment

Env Material: sediment

Env Biome: hot spring

Other

Ph: 6.1

Depth: 10 cm

Rel To Oxygen: anaerobe

Isol Growth Condt: 23231658

Package

Not detected

All retrieved samples

• SAMN02999931: Pyrobaculum yellowstonensis strain WP30 complete genome

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Metadata retrieved 20 days ago