JSON

Genome sc|0005625

Name

Not registered

Database

NCBI Assembly

Accession

GCA_029982035.1

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
NCBI Assembly:GCA_029982035.1
Type
Single-Cell Amplified Genome (SAG)
Estimated Quality Metrics
  • Completeness: 98.1%
  • Contamination: 2.8%
  • Quality: 84.1
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 34.16%
  • Coding Density: 85.3%
  • Codon Table: 11
  • N50: 1,727,493 bp
  • Contigs: 3
  • Largest Contig: 1,727,493 bp
  • Assembly Length: 2,000,552 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Edit genome data
Last modified about 6 hours ago

Sample Metadata

BioSample entries
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Sample Type: mixed culture
Isolation Source: freshwater
Other
Host: Cryptomonas gyropyrenoidosa SAG 25.80
Package
Not detected
All retrieved samples
Metadata retrieved about 6 hours ago (queued for update about 6 hours ago)


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