Genome sc|0000057

Genomics

Accession

NCBI Assembly:GCA_900290245.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 91.5%
• Contamination: 2.8%
• Quality: 77.5

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 17 amino acids

Source

• BioSample: SAMN07714389

Other features

• G+C Content: 59.43%
• Coding Density: 86.36%
• Codon Table: 11
• N50: 79,929 bp
• Contigs: 162
• Largest Contig: 269,762 bp
• Assembly Length: 5,286,421 bp
• Ambiguous Assembly Fraction: 0.016%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN07714389

Date

Collection Date: 2010-09-21

Location

Lat Lon: 50.131881 N 11.881046 E

Toponym

Geo Loc Name: Germany: Schloeppnerbrunnen fen II, Fichtel Mountains, northeastern Bavaria

Environment

Env Material: peat soil

Env Biome: fen

Other

Ph: 5-Apr

Depth: 0.1-0.2 m

Rel To Oxygen: anaerobe

Isol Growth Condt: metagenome-assembled genome (MAG)

Package

Ncbi Submission Package: MIGS.ba.soil.5.0

Biosamplemodel: MIGS/MIMS/MIMARKS.soil

All retrieved samples

• SAMN07714389: Peat soil acidobacterial MAG SbA5

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Metadata retrieved about 1 month ago