Genome sc|0000059


Database

NCBI Assembly

Accession

GCA_014764525.1

Genomics

Accession
NCBI Assembly:GCA_014764525.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.2%
  • Contamination: 3.4%
  • Quality: 74.2
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 14 amino acids
Source
Other features
  • G+C Content: 60.9%
  • Coding Density: 91.44%
  • Codon Table: 11
  • N50: 5,914 bp
  • Contigs: 783
  • Largest Contig: 59,750 bp
  • Assembly Length: 3,935,293 bp
  • Ambiguous Assembly Fraction: 0.36%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2016-07
Location
Lat Lon: 79.713833 N 11.085000 E
Toponym
Geo Loc Name: Svalbard: Smeerenburgfjorden
Environment
Sample Type: metagenomic assembly
Isolation Source: marine sediment; Station J, 5-10 cmbsf, microcosm with tetrathionate + molybdate
Other
Not detected
Package
Ncbi Submission Package: Microbe.1.0Metagenome.environmental.1.0
Biosamplemodel: Microbe, viral or environmental • Metagenome or environmental
All retrieved samples

Metadata retrieved 5 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license