Genome sc|0006005

Genomics

Accession

NCBI Assembly:GCF_008710285.1

Cultures

Strain sc|0041761

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 96.2%
• Contamination: 0.9%
• Quality: 91.7

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

30.0 ×

Source

• BioSample: SRS6653920

Other features

• G+C Content: 37.64%
• Coding Density: 87.71%
• Codon Table: 11
• N50: 655,202 bp
• Contigs: 33
• Largest Contig: 2,227,350 bp
• Assembly Length: 5,505,520 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified 8 days ago

Sample Metadata

BioSample entries

• BioSample: SRS6653920

Date

Collection Date: 2008-09

Location

Not detected

Toponym

Geo Loc Name: China: Baekdu Mountain

Environment

Sample Type: whole organism

Isolation Source: ginseng field

Other

Not detected

Package

Not detected

All retrieved samples

• SRS6653920: Ginsengibacter sp. BR5-29 isolated from ginseng field at Baekdu Mountain

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Metadata retrieved 8 days ago