SeqCode Registry
cognitis nomina
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Genomes
sc|0006062
JSON
Genome sc|0006062
Name
“Aliimethylobacter tundripaludum”
Database
NCBI Assembly
Accession
GCA_000190755.3
This genome is derived from
Strain sc|0021038
, which serves as the nomenclatural type for:
Methylobacter tundripaludum
Genomics
Accession
NCBI Assembly:
GCA_000190755.3
Cultures
Strain sc|0021038
Type
Isolate Genome
Estimated Quality Metrics
Completeness:
98.1%
Contamination:
2.8%
Quality:
84.1
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 100.0%)
3 23S rRNAs (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
28.0 ×
Source
BioSample: SAMN00102804
Other features
G+C Content:
49.5%
Coding Density:
86.69%
Codon Table:
11
N50:
2,936,421 bp
Contigs:
3
Largest Contig:
2,936,421 bp
Assembly Length:
4,848,329 bp
Ambiguous Assembly Fraction:
0.029%
Automated checks
Complete
Last modified
14 days ago
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All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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