Genome sc|0006250 ^Ts

Typification

Nomenclatural type of:

• Arsenophonus lipoptenae

Genomics

Accession

NCBI Assembly: GCA_001534665.1 [NCBI | EMBL]

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 98.1%
• Contamination: 0.9%
• Quality: 93.6

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

40.0 ×

Source

• BioSample: SAMN04338047

Other features

• G+C Content: 24.87%
• Coding Density: 74.84%
• Codon Table: 11
• N50: 836,724 bp
• Contigs: 1
• Largest Contig: 836,724 bp
• Assembly Length: 836,724 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

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Last modified about 1 month ago

Sample Metadata

BioSample entries

• BioSample: SAMN04338047

Date

Collection Date: 2010

Location

Not detected

Toponym

Geo Loc Name: Czech Republic

Environment

Sample Type: tissue sample

Other

Host: Lipoptena fortisetosa

Package

Not detected

All retrieved samples

• SAMN04338047: Candidatus Arsenophonus lipopteni strain CB

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Metadata retrieved about 1 month ago