JSON

Genome sc|0006301 Ts

Name

“Ordinivivax streblomastichis”

Database

NCBI Assembly

Accession

GCA_008634845.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly: GCA_008634845.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 93.4%
  • Contamination: 15.1%
  • Quality: 17.9
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 20 amino acids
Source
Other features
  • G+C Content: 42.7%
  • Coding Density: 92.14%
  • Codon Table: 11
  • N50: 87,757 bp
  • Contigs: 247
  • Largest Contig: 417,286 bp
  • Assembly Length: 4,846,489 bp
  • Ambiguous Assembly Fraction: 0.012%
Automated checks
Complete
Last modified 14 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2015-05-15
Location
Lat Lon: 48° 59′ 50″ N, 123° 34′ 60″ W
View map of sampling locations
Toponym
Geo Loc Name: Canada: Devina Drive, Southern Gulf Islands Electoral Area, BC
Environment
Sample Type: metagenomic assembly
Isolation Source: single cell of protist host amplifed by MDA from Zootermopsis angusticollis gut
Other
Host: Streblomastix strix
Package
Not detected
All retrieved samples
Metadata retrieved 14 days ago


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