Genome sc|0006304 Ts


Database

NCBI Assembly

Accession

GCA_004102645.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly: GCA_004102645.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.5%
  • Contamination: 0.0%
  • Quality: 91.5
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
55.0 ×
Source
Other features
  • G+C Content: 67.23%
  • Coding Density: 91.09%
  • Codon Table: 11
  • N50: 1,701,655 bp
  • Contigs: 1
  • Largest Contig: 1,701,655 bp
  • Assembly Length: 1,701,655 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Last modified 9 days ago

Sample Metadata

BioSample entries
Date
Collection Date: 2016-04-28
Location
Lat Lon: 58° 3′ 37″ N, 82° 49′ 36″ E
View map of sampling locations
Toponym
Geo Loc Name: Russia: Chazhemto settlement, Tomsk oblast
Environment
Isolation Source: 2.8-km deep subsurface aquifer
Other
Not detected
Package
Not detected
All retrieved samples

Metadata retrieved 9 days ago

Sequencing Experiments

Metagenome sequencing of microbial community from oil-prospecting borehole 5P in the region of the Chazhemto settlement, Tomsk oblast, Russia, drilled to a depth of 2.8 km.


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