SeqCode Registry
cognitis nomina
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Genomes
sc|0006308
Ts
JSON
Genome sc|0006308
Ts
Name
“Defluviicoccus seviourii”
Database
NCBI Assembly
Accession
GCA_900609035.2
Typification
Nomenclatural type of:
“Defluviicoccus seviourii”
Genomics
Accession
NCBI Assembly:
GCA_900609035.2
[
NCBI
|
EMBL
]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
99.1%
Contamination:
0.0%
Quality:
99.1
Ribosomal and transfer RNA genes
2 16S rRNAs (up to 100.0%)
2 23S rRNAs (up to 100.0%)
tRNAs for 20 amino acids
Sequencing depth
100.0 ×
Source
BioSample: SAMEA4805506
Other features
G+C Content:
64.83%
Coding Density:
89.21%
Codon Table:
11
N50:
139,823 bp
Contigs:
54
Largest Contig:
290,482 bp
Assembly Length:
3,288,346 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
about 5 hours ago
Sample Metadata
BioSample entries
BioSample: SAMEA4805506
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Ena Checklist:
ERC000011
All retrieved samples
SAMEA4805506
: Genome annotation of Candidatus Defluviicoccus seviourii
Metadata retrieved
about 5 hours ago
© 2022-2026 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMEA4805506
×
Metadata retrieved using the EBI BioSample API
BioSample Accession(s)
SAMEA4805506, ERS2625417
ENA-CHECKLIST
ERC000011
ENA-FIRST-PUBLIC
2018-08-30T17:03:54Z
ENA-LAST-UPDATE
2019-04-14T08:56:39Z
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