JSON

Genome sc|0006476 Ts

Name

“Arsenophonus melophagi”

Database

NCBI Assembly

Accession

GCA_032378655.1

Typification

Nomenclatural type of:

Genomics

Accession
NCBI Assembly: GCA_032378655.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 0.9%
  • Quality: 94.6
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 32.19%
  • Coding Density: 60.58%
  • Codon Table: 11
  • N50: 87,029 bp
  • Contigs: 40
  • Largest Contig: 116,563 bp
  • Assembly Length: 1,155,312 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
Last modified about 18 hours ago

Sample Metadata

BioSample entries
Date
Collection Date: 2013
Location
Lat Lon: 48° 52′ 58″ N, 14° 18′ 56″ E
View map of sampling locations
Toponym
Geo Loc Name: Czech Republic
Environment
Sample Type: metagenomic assembly
Isolation Source: symbiont of louse fly isolated from Ovis aries
Env Broad Scale: bacteriome of Melophagus ovinus
Env Medium: bacteriome of louse fly Melophagus ovinus
Other
Host: Melophagus ovinus
Package
Not detected
All retrieved samples
Metadata retrieved about 19 hours ago


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