SeqCode Registry
cognitis nomina
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Genomes
sc|0006493
Ts
JSON
Genome sc|0006493
Ts
Name
“Coxiella mudrowiae”
Database
NCBI Assembly
Accession
GCA_001077715.1
Typification
Nomenclatural type of:
“Coxiella mudrowiae”
Genomics
Accession
NCBI Assembly:
GCA_001077715.1
[
NCBI
|
EMBL
]
Type
Enrichment Genome
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
9.4%
Quality:
53.0
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Source
BioSample: SAMN03445847
Other features
G+C Content:
38.17%
Coding Density:
63.27%
Codon Table:
11
N50:
1,733,840 bp
Contigs:
1
Largest Contig:
1,733,840 bp
Assembly Length:
1,733,840 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
2 days ago
Sample Metadata
BioSample entries
BioSample: SAMN03445847
Date
Collection Date:
2010
Location
Not detected
Toponym
Geo Loc Name:
Israel: kibutz Hulda
Environment
Sample Type:
bacterial enrichment from host tissue
Other
Host:
Rhipicephalus turanicus
Package
Not detected
All retrieved samples
SAMN03445847
: Sample from Coxiella-like endosymbiont from Rhipicephalus turanicus
Metadata retrieved
2 days ago
© 2022-2026 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN03445847
×
Metadata retrieved using the EBI BioSample API
BioSample Accession(s)
SAMN03445847
collection date
2010
geo loc name
Israel: kibutz Hulda
host
Rhipicephalus turanicus
sample type
bacterial enrichment from host tissue
strain
CRt
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