SeqCode Registry
cognitis nomina
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Genomes
sc|0006500
Ts
JSON
Genome sc|0006500
Ts
Name
“Methanomassiliicoccus intestinalis”
Database
NCBI Assembly
Accession
GCA_000404225.1
Typification
Nomenclatural type of:
“Methanomassiliicoccus intestinalis”
Genomics
Accession
NCBI Assembly:
GCA_000404225.1
[
NCBI
|
EMBL
]
Type
Enrichment Genome
Estimated Quality Metrics
Completeness:
100.0%
Contamination:
0.0%
Quality:
100.0
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 20 amino acids
Source
BioSample: SAMN03081468
Other features
G+C Content:
41.26%
Coding Density:
88.22%
Codon Table:
11
N50:
1,931,651 bp
Contigs:
1
Largest Contig:
1,931,651 bp
Assembly Length:
1,931,651 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
Last modified
1 day ago
Sample Metadata
BioSample entries
BioSample: SAMN03081468
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Isolation Source:
enrichment culture from feces
Other
Not detected
Package
Not detected
All retrieved samples
SAMN03081468
: Sample from Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
Metadata retrieved
1 day ago
© 2022-2026 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN03081468
×
Metadata retrieved using the EBI BioSample API
BioSample Accession(s)
SAMN03081468
country
France
isolation-source
enrichment culture from feces
nat-host
Homo sapiens
strain
Issoire-Mx1
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