Genome sc|0000066


Database

NCBI Assembly

Accession

GCA_023539445.1

Genomics

Accession
NCBI Assembly:GCA_023539445.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 96.11%
  • Contamination: 0.0%
  • Quality: 96.11
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
80.0 ×
Source
Other features
  • G+C Content: 46.1%
  • Coding Density: 91.76%
  • Codon Table: 11
  • N50: 105,389 bp
  • Contigs: 35
  • Largest Contig: 241,502 bp
  • Assembly Length: 1,158,832 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2019
Location
Lat Lon: 44.56097 N 110.83286 W
Toponym
Geo Loc Name: USA: Yellowstone National Park
Environment
Isolation Source: hot spring sediment from LGB-05 spring
Env Broad Scale: ENVO:00000051
Env Local Scale: ENVO:0000207
Env Medium: ENVO:0000207
Other
Depth: 1-20 cm
Package
Ncbi Submission Package: MIMS.me.sediment.6.0
Biosamplemodel: MIGS/MIMS/MIMARKS.sediment
All retrieved samples

Metadata retrieved 5 months ago


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