Genome sc|0000074

Genomics

Accession

NCBI Assembly:GCA_943193005.1

Type

Isolate Genome

Estimated Quality Metrics

• Completeness: 97.2%
• Contamination: 1.9%
• Quality: 87.7

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 78.0%)
• 1 23S rRNA (up to 50.0%)
• tRNAs for 20 amino acids

Sequencing depth

40.0 ×

Source

• BioSample: SAMEA14418526

Other features

• G+C Content: 49.56%
• Coding Density: 91.15%
• Codon Table: 11
• N50: 110,226 bp
• Contigs: 50
• Largest Contig: 214,313 bp
• Assembly Length: 2,344,908 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

Sample Metadata

Date

Collection Date: 2022-04-29

Location

Geographic Location Latitude: 50.776389

Geographic Location Longitude: 6.043611

Toponym

Geographic Location Country And Or Sea: Germany

Environment

Environment Biome: mouse gastrointestinal tract

Environment Feature: mouse intestine

Other

Not detected

Package

Ena Checklist: ERC000013

All retrieved samples

• SAMEA14418526: Assembly for Eubacteriales_fam_nov_CLA_AA_M10

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Metadata retrieved 10 months ago