JSON

Genome sc|0000808

Name

“Deltaporibacter stylissae”

Database

NCBI Assembly

Accession

GCA_028817435.1

Genomics

Accession
NCBI Assembly:GCA_028817435.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 90.1%
  • Contamination: 0.84%
  • Quality: 85.9
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 2 23S rRNAs (up to 62.0%)
  • tRNAs for 21 amino acids
Sequencing depth
10.0 ×
Source
Other features
  • G+C Content: 66.82%
  • Coding Density: 94.08%
  • Codon Table: 11
  • N50: 140,422 bp
  • Contigs: 67
  • Largest Contig: 389,125 bp
  • Assembly Length: 2,797,949 bp
  • Ambiguous Assembly Fraction: 0.014%
Automated checks
Complete

Sample Metadata

Date
Collection Date: 2015-12-22
Location
Lat Lon: 18.832467 S 147.633250 E
Toponym
Geo Loc Name: Australia: Davies Reef
Environment
Sample Type: metagenomic assembly
Other
Host: Stylissa flabelliformis
Package
Ncbi Submission Package: Microbe.1.0
Biosamplemodel: Microbe, viral or environmental
All retrieved samples
Metadata retrieved 9 months ago


© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license