Genome sc|0000812

Genomics

Accession

NCBI Assembly:GCA_030954495.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 99.5%
• Contamination: 4.8%
• Quality: 75.5

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 3 23S rRNAs (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

15103.0 ×

Source

• BioSample: SAMN35436754

Other features

• G+C Content: 44.0%
• Coding Density: 83.39%
• Codon Table: 11
• N50: 116,337 bp
• Contigs: 84
• Largest Contig: 324,436 bp
• Assembly Length: 5,591,411 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

The genome was obtained via sequencing of a highly enriched culture. Genome completeness and contamination were estimated using CheckM.

Automated checks

Complete

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Last modified 11 days ago

Sample Metadata

BioSample entries

• BioSample: SAMN35436754

Date

Collection Date: 2021-08-01

Location

Not detected

Toponym

Not detected

Environment

Env Broad Scale: Tropical forest biome

Env Local Scale: Tropical forest biome

Env Medium: Enrichment culture

Other

Not detected

Package

Ncbi Submission Package: MIGS.ba.soil.6.0

Biosamplemodel: MIGS/MIMS/MIMARKS.soil

All retrieved samples

• SAMN35436754: Desulfosporosinus sp. (Co-culture)

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Metadata retrieved 11 days ago