SeqCode Registry
cognitis nomina
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Genomes
sc|0000832
JSON
Genome sc|0000832
Name
“Heterorubrivivax aquaticus”
Database
NCBI Assembly
Accession
GCA_022842305.1
Genomics
Accession
NCBI Assembly:
GCA_022842305.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
94.0%
Contamination:
2.2%
Quality:
83.0
Ribosomal and transfer RNA genes
1 16S rRNA (up to 72.0%)
0 23S rRNAs
tRNAs for 17 amino acids
Sequencing depth
156.2 ×
Source
SRA: SAMN21474388
Other features
G+C Content:
69.63%
Coding Density:
91.81%
Codon Table:
11
N50:
26,322 bp
Contigs:
324
Largest Contig:
160,400 bp
Assembly Length:
5,192,285 bp
Ambiguous Assembly Fraction:
0.037%
Automated checks
Complete
Sample Metadata
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
No BioSample metadata was found associated to this genome.
Metadata retrieved
10 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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