SeqCode Registry
cognitis nomina
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Genomes
sc|0000835
JSON
Genome sc|0000835
Name
“Metarubrivivax aquatilis”
Database
NCBI Assembly
Accession
GCA_022842825.1
Genomics
Accession
NCBI Assembly:
GCA_022842825.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
96.8%
Contamination:
2.8%
Quality:
84.1
Ribosomal and transfer RNA genes
1 16S rRNA (up to 37.0%)
0 23S rRNAs
tRNAs for 21 amino acids
Sequencing depth
100.7 ×
Source
BioSample: SAMN21474358
Other features
G+C Content:
70.7%
Coding Density:
91.27%
Codon Table:
11
N50:
16,696 bp
Contigs:
502
Largest Contig:
80,285 bp
Assembly Length:
5,730,705 bp
Ambiguous Assembly Fraction:
0.16%
Automated checks
Complete
Sample Metadata
BioSample entries
BioSample: SAMN21474358
Date
Not detected
Location
Not detected
Toponym
Not detected
Environment
Not detected
Other
Not detected
Package
Not detected
All retrieved samples
SAMN21474358
:
Metadata retrieved
10 months ago
© 2022-2024 The SeqCode Initiative
All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
SAMN21474358
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