SeqCode Registry
cognitis nomina
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Genomes
sc|0000842
JSON
Genome sc|0000842
Name
“Paenirubrivivax limi”
Database
NCBI Assembly
Accession
GCA_016708365.1
Genomics
Accession
NCBI Assembly:
GCA_016708365.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
Completeness:
94.2%
Contamination:
3.6%
Quality:
76.2
Ribosomal and transfer RNA genes
1 16S rRNA (up to 100.0%)
1 23S rRNA (up to 100.0%)
tRNAs for 17 amino acids
Sequencing depth
13.8 ×
Source
BioSample: SAMN16425702
BioSample: SAMN14825675
Other features
G+C Content:
67.63%
Coding Density:
89.1%
Codon Table:
11
N50:
532,821 bp
Contigs:
25
Largest Contig:
901,058 bp
Assembly Length:
5,175,569 bp
Ambiguous Assembly Fraction:
0.0%
Automated checks
Complete
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All information contributed to the SeqCode Registry is released under the terms of the
Creative Commons Attribution (CC BY) 4.0
license
Automated Estimates
×
This genome was automatically retrieved and processed using MiGA (The Microbial Genomes Atlas)
[1]
, and the estimate has not been overridden by the submitter.
Rodriguez-R et al, 2018, NAR.
DOI: 10.1093/nar/gky467
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