JSON

Genome sc|0000973

Name

Not registered

Database

INSDC Nucleotide

Accession

JAVKJV000000000

Marked for deletion

This genome is currently not registered as the nomenclatural type or the reference genome of any names in the Registry, and it will be purged from the database soon unless it is linked to a name

Genomics

Accession
INSDC Nucleotide:JAVKJV000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.59% (automated estimate: 91.5%)
  • Contamination: 2.04% (automated estimate: 0.0%)
  • Quality: 82.39 (automated estimate: 91.5)
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 39.0%) (automated estimate: 1)
  • 1 23S rRNA (up to 99.0%) (automated estimate: 0)
  • tRNAs for 42 amino acids (automated estimate: 20)
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 68.83% (automated estimate: 68.82%)
  • Coding Density: 93.56%
  • Codon Table: 11
  • N50: 52,927 bp
  • Contigs: 137
  • Largest Contig: 196,893 bp
  • Assembly Length: 3,710,879 bp
  • Ambiguous Assembly Fraction: 0.0038%
Automated checks
Complete
Edit genome data
Last modified about 1 year ago


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