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“Nitrosopumilus koreensis”

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Citation

Formal styling
“Nitrosopumilus koreensis” Park et al., 2012
Effective publication
Park et al., 2012
SeqCode status
Automated discovery
Canonical URL
https://seqco.de/i:124

Nomenclature

Rank
Species
Etymology
koreensis
Nomenclatural type
Genome sc|0006503 Ts

Taxonomy

Classification
Archaea » Thermoproteota » Nitrososphaeria » Nitrosopumilales » Nitrosopumilaceae » Nitrosopumilus » “Nitrosopumilus koreensis”
Parent
Nitrosopumilus gtdb
Alternative placements

Genomics

Accession
NCBI Assembly: GCA_000299365.1 [NCBI | EMBL]
Type
Enrichment Genome
Estimated Quality Metrics
  • Completeness: 96.2%
  • Contamination: 0.0%
  • Quality: 96.2
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 34.18%
  • Coding Density: 90.05%
  • Codon Table: 11
  • N50: 1,639,964 bp
  • Contigs: 1
  • Largest Contig: 1,639,964 bp
  • Assembly Length: 1,639,964 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 15 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 7 years ago by Excubia bot

Publications
4

Citation Title
Wang et al., 2021, Nucleic Acids Research Sequence specific integration by the family 1 casposase from CandidatusNitrosopumilus koreensis AR1
Oren et al., 2020, International Journal of Systematic and Evolutionary Microbiology Lists of names of prokaryotic Candidatus taxa
Kim et al., 2016, Biotechnology Letters A cold-adapted tyrosinase with an abnormally high monophenolase/diphenolase activity ratio originating from the marine archaeon Candidatus Nitrosopumilus koreensis
Park et al., 2012, Journal of Bacteriology Draft Genome Sequence of an Ammonia-Oxidizing Archaeon, “Candidatus Nitrosopumilus koreensis” AR1, from Marine Sediment
Effective publication


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