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Tiddalikarchaeum anstoanumTs

Citation

Formal styling
Tiddalikarchaeum anstoanumTs Vázquez-Campos et al., 2021 (priority 2025)
Effective publication
Vázquez-Campos et al., 2021
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:nsvepduf (validated)
Canonical URL
https://seqco.de/i:23455

Nomenclature

Rank
Species
Syllabication
ans.to.a'num
Etymology
N.L. neut. adj. anstoanum, from ANSTO, Australian Nuclear Science and Technology Organisation, institution managing the Little Forest Legacy Site
Nomenclatural type
NCBI Assembly: GCA_902385255.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The type material is the metagenome assembled genome (MAG) LFW-252_1 (ERS2655302) recovered from the groundwater of the Little Forest Legacy Site (NSW, Australia). The MAG consists of 1.16 Mbp in 56 contigs with an estimated completeness of 95.7%, redundancy of 1.1%, 16S, 23S, and 5S rRNA gene, and 21 tRNAs. The GC content of this MAG is 36.5%.
 The type material appears in GTDB r202 (Parks et al., 2017) as reference for s__CABMEV01 sp902385255.
Classification
Archaea » Nanobdellota » Nanobdellia » Tiddalikarchaeales » Tiddalikarchaeaceae » Tiddalikarchaeum » Tiddalikarchaeum anstoanumTs
Parent
Tiddalikarchaeum gtdb
Pseudonyms
  • CABMEV01 sp902385255 (Alphanumeric placeholder accession)

Genomics

Accession
NCBI Assembly:GCA_902385255.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.7%
  • Contamination: 1.08%
  • Quality: 90.3
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 2 23S rRNAs (up to 63.0%)
  • tRNAs for 20 amino acids
Sequencing depth
11.5 ×
Source
Other features
  • G+C Content: 36.55%
  • Coding Density: 93.15%
  • Codon Table: 11
  • N50: 114,934 bp
  • Contigs: 13
  • Largest Contig: 208,285 bp
  • Assembly Length: 1,159,435 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness/redundancy estimates derived from the DPANN93 marker set from Vázquez-Campos et al 2021, adjusted for commonly absent genes in DPANN (also works with other reduced archaeal genomes like in some Thermoplasmatota).
tRNA counts may include iMet, Sec, Ile2 or undetermined aminoacyl types.
Automated checks
Complete
See additional details
Last modified 16 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 3 years ago by Vázquez-Campos, Xabier
Submitted
7 months ago by Vázquez-Campos, Xabier
Curators
Validated
11 days ago by St. John, Emily
Date of priority
2025-05-22 09:24 AM (UTC)

Publications
1

Citation Title
Vázquez-Campos et al., 2021, Frontiers in Microbiology Genomic Insights Into the Archaea Inhabiting an Australian Radioactive Legacy Site
Effective publication


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seqco.de/r:nsvepduf