Poriferisocius aerobius^Ts

Citation

Formal styling

Poriferisocius aerobius^Ts Nguyen et al., 2023

Effective publication

Nguyen et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:v1sky3wb (validated)

Canonical URL

https://seqco.de/i:23658

Nomenclature

Rank

Species

Syllabication

ae.ro'bi.us

Etymology

Gr. masc. n. aer, air; Gr. masc. n. bios, life; N.L. masc. adj. aerobius, one who lives with air

Nomenclatural type

NCBI Assembly: GCA_028278955.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Symbiont found to be enriched in sponge microbiomes, and no other environments. 

Classification

Bacteria » Actinomycetota » Acidimicrobiia » Acidimicrobiales » Hopanoidiivorantaceae » Poriferisocius » Poriferisocius aerobius^Ts

Parent

Poriferisocius gtdb

Genomics

Accession

NCBI Assembly:GCA_028278955.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 94.87%
• Contamination: 0.85%
• Quality: 90.62

Ribosomal and transfer RNA genes

• 2 16S rRNAs (up to 80.0%)
• 1 23S rRNA (up to 67.0%)
• tRNAs for 19 amino acids

Sequencing depth

24.0 ×

Source

• BioSample: SAMN31047471
• And 3 more…

Other features

• G+C Content: 66.68%
• Coding Density: 92.33%
• Codon Table: 11
• N50: 15,477 bp
• Contigs: 225
• Largest Contig: 53,800 bp
• Assembly Length: 2,477,953 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

See full comment

Automated checks

Complete

See additional details

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Last modified 8 days ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_028278955.1
• GTDB Tree: s__Poriferisocius aerobius
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Poriferisocius aerobius (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified about 1 year ago
• Submission process status
• Quality checks before valid publication

Registered by

Thomas, Torsten about 2 years ago

Submitted by

Thomas, Torsten about 1 year ago

Curators

• Rodriguez-R, Luis M
• Palmer, Marike

Endorsed by

Palmer, Marike about 1 year ago

Validated by

Palmer, Marike about 1 year ago

Date of priority

2023-08-25 02:22 PM (UTC)