Houyiibacterium oceanicum^Ts

Citation

Formal styling

Houyiibacterium oceanicum^Ts corrig. Li et al., 2023 (priority 2025)

Effective publication

Li et al., 2023

Corrigendum

In SeqCode Registry from “Houyibacterium oceanica” (sic)

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:kouay5c4 (validated)

Canonical URL

https://seqco.de/i:31318

Nomenclature

Rank

Species

Syllabication

o.ce.a'ni.cum

Etymology

N.L. fem. adj. oceanicum, of or pertaining to the ocean

Nomenclatural type

NCBI Assembly: GCA_031800675.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The nomenclatural type for the species is the genomic assembly LLY-WYZ-15_3 (GCA_031800675.1). Genome is predicted to 9.41 Mb in 214 scaffolds. The GC content is 73.94%. Genome has complete bacteriochlorophyll synthesis pathways, and encodes reaction center proteins and other key enzymes, suggesting potential phototrophic lifestyle. Genome also has PR, suggesting the potential capacity using both proton-pumping and bacteriochlorophyll-based photosystems. Genomic assemblies for this species originated from seawater.

Classification

Bacteria » Myxococcota » Polyangiia » Polyangiales » Houyiibacteriaceae » Houyiibacterium » Houyiibacterium oceanicum^Ts

Parent

Houyiibacterium

Pseudonyms

• Houyibacterium oceanica (Original, corrected name)

Genomics

Accession

NCBI Assembly:GCA_031800675.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 94.62%
• Contamination: 1.4%
• Quality: 87.62

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 27.0%)
• tRNAs for 20 amino acids

Sequencing depth

35.7 ×

Source

• BioSample: SAMEA2623477

Other features

• G+C Content: 73.94%
• Coding Density: 87.1%
• Codon Table: 11
• N50: 78,702 bp
• Contigs: 214
• Largest Contig: 273,429 bp
• Assembly Length: 9,413,717 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified 4 months ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_031800675.1
• Wikispecies: Houyiibacterium oceanicum
• Wikidata: Q136334527

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 3 months ago
• Submission process status
• Quality checks before valid publication

Registered

About 2 years ago by Li, Liuyang

Submitted

4 months ago by Li, Liuyang

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated

3 months ago by Palmer, Marike

Date of priority

2025-08-05 02:09 PM (UTC)