Pelearchaeum maunauluense^Ts

Citation

Formal styling

Pelearchaeum maunauluense^Ts Balbay et al., 2023

Effective publication

Balbay et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:-286wyu6 (validated)

Canonical URL

https://seqco.de/i:31328

Nomenclature

Rank

Species

Syllabication

ma.u.na.u.lu.en'se

Etymology

N.L. neut. adj. maunauluense, of Mauna Ulu volcano in Hawaii

Nomenclatural type

NCBI Assembly: GCA_030059675.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

This species is the type for the genus Pelearchaeum. The metagenome-assembled genome size of this species is 1.79 Mbp, contains 21 contigs, with GC% of 50.42. The size of the largest contig is 371 Kbp. The estimated genome size is 1.87 Mbp. The assembly originated from a sample collected from active fumaroles around Mauna Ulu volcano of Hawaii.

Classification

Incertae sedis (Archaea) » “Caldarchaeales” » Calditenuaceae » Pelearchaeum » Pelearchaeum maunauluense^Ts

Parent

Pelearchaeum gtdb

Genomics

Accession

NCBI Assembly:GCA_030059675.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 95.63%
• Contamination: 0.97%
• Quality: 90.78

Ribosomal and transfer RNA genes

• 3 16S rRNAs (up to 53.0%)
• 2 23S rRNAs (up to 100.0%)
• tRNAs for 21 amino acids

Sequencing depth

100.0 ×

Source

• BioSample: SAMN30441136
• BioSample: SAMN30496950

Other features

• G+C Content: 50.42%
• Coding Density: 90.38%
• Codon Table: 11
• N50: 185,085 bp
• Contigs: 21
• Largest Contig: 371,327 bp
• Assembly Length: 1,786,704 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

The total size of the three 16S rRNA gene fragments is 1439 bp. It is just that they are on different contig ends.

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_030059675.1
• GTDB Tree: s__Pelearchaeum maunauluense
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Pelearchaeum maunauluense (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified about 1 year ago
• Submission process status
• Quality checks before valid publication

Registered by

Saw, Jimmy over 1 year ago

Submitted by

Saw, Jimmy about 1 year ago

Curators

• Rodriguez-R, Luis M
• Palmer, Marike

Validated by

Rodriguez-R, Luis M about 1 year ago

Date of priority

2023-11-17 07:38 PM (UTC)