Thermobaculum terrenumTs


Citation

Formal styling
Thermobaculum terrenumTs Botero et al., 2004 (valid 2023)
Effective publication
Botero et al., 2004
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:lei3s4u5 (validated)
Canonical URL
https://seqco.de/i:31970

Nomenclature

Rank
Species
Syllabication
ter.re'num
Etymology
L. neut. adj. terrenum, belonging to earth/soil
Nomenclatural type
NCBI Assembly: GCF_000025005.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The description is the same as given by Botero et al., 2004: 
Cells are non-motile, measuring 1–1.5×2–3 µm, and are enveloped by a thick cell wall (~34 nm with transmission electron microscopy) external to a cytoplasmic membrane. Colonies are pink in color. Growth occurs between 41 and 75 °C (optimum 67 °C), at pH 6–8 (optimum 7.0), and optimally in complex media containing 0.5% NaCl. Growth on yeast extract [required for growth factor(s)], fructose, glucose, ribose, sorbitol, sucrose, xylose, and xylitol. Membrane composed primarily of straightchain and branched fatty acids, murein present in large amounts consistent with thick cell wall, 56.4 mol% G+C. The type strain YNP1T has been deposited in the American Type Culture Collection as accession number ATCC BAA-798 and in the University of Oregon Culture Collection of Microorganisms from Extreme Environments as accession number CCMEE 7001
Classification
Bacteria » Chloroflexota » Chloroflexia » Thermobaculales » Thermobaculaceae » Thermobaculum » Thermobaculum terrenumTs
Parent
Thermobaculum ncbigtdb

Genomics

Accession
NCBI Assembly:GCF_000025005.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.58%
  • Contamination: 0.0%
  • Quality: 98.58
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
10.0 ×
Source
Other features
  • G+C Content: 53.51%
  • Coding Density: 91.52%
  • Codon Table: 11
  • N50: 2,026,947 bp
  • Contigs: 2
  • Largest Contig: 2,026,947 bp
  • Assembly Length: 3,101,581 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Last modified 12 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Chuvochina, Maria over 1 year ago
Submitted by
Chuvochina, Maria over 1 year ago
Curators
Endorsed by
Palmer, Marike over 1 year ago
Validated by
Rodriguez-R, Luis M over 1 year ago
Date of priority
2023-08-15 06:49 AM (UTC)

Publications
1

Citation Title
Botero et al., 2004, Archives of Microbiology Thermobaculum terrenum gen. nov., sp. nov.: a non-phototrophic gram-positive thermophile representing an environmental clone group related to the Chloroflexi (green non-sulfur bacteria) and Thermomicrobia
Effective publication



© 2022-2024 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license