Thermobaculum terrenumTs


Citation

Formal styling
Thermobaculum terrenumTs Botero et al., 2004 (valid 2023)
Effective publication
Botero et al., 2004
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:lei3s4u5 (validated)
Cannonical URL
https://seqco.de/i:31970

Nomenclature

Rank
Species
Syllabication
ter.re'num
Etymology
L. neut. adj. terrenum, belonging to earth/soil
Nomenclatural type
NCBI Assembly: GCF_000025005.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The description is the same as given by Botero et al., 2004: 
Cells are non-motile, measuring 1–1.5×2–3 µm, and are enveloped by a thick cell wall (~34 nm with transmission electron microscopy) external to a cytoplasmic membrane. Colonies are pink in color. Growth occurs between 41 and 75 °C (optimum 67 °C), at pH 6–8 (optimum 7.0), and optimally in complex media containing 0.5% NaCl. Growth on yeast extract [required for growth factor(s)], fructose, glucose, ribose, sorbitol, sucrose, xylose, and xylitol. Membrane composed primarily of straightchain and branched fatty acids, murein present in large amounts consistent with thick cell wall, 56.4 mol% G+C. The type strain YNP1T has been deposited in the American Type Culture Collection as accession number ATCC BAA-798 and in the University of Oregon Culture Collection of Microorganisms from Extreme Environments as accession number CCMEE 7001
Classification
Bacteria » Chloroflexota » Chloroflexia » Thermobaculales » Thermobaculaceae » Thermobaculum » Thermobaculum terrenumTs
Parent
Thermobaculum ncbigtdb

Genomics

Accession
NCBI Assembly:GCF_000025005.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 98.58%
  • Contamination: 0.0%
  • Quality: 98.58
Ribosomal and transfer RNA genes
  • 2 16S rRNAs (up to 100.0%)
  • 2 23S rRNAs (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
10.0 ×
Source
Other features
  • G+C Content: 53.51%
  • Coding Density: 91.52%
  • Codon Table: 11
  • N50: 2,026,947 bp
  • Contigs: 2
  • Largest Contig: 2,026,947 bp
  • Assembly Length: 3,101,581 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Chuvochina, Maria 11 months ago
Submitted by
Chuvochina, Maria 10 months ago
Curators
Endorsed by
Palmer, Marike 10 months ago
Validated by
Rodriguez-R, Luis M 9 months ago

Publications
1

Citation Title
Botero et al., 2004, Archives of Microbiology Thermobaculum terrenum gen. nov., sp. nov.: a non-phototrophic gram-positive thermophile representing an environmental clone group related to the Chloroflexi (green non-sulfur bacteria) and Thermomicrobia
Effective publication



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