Amarolinea aalborgensis^Ts

Citation

Formal styling

Amarolinea aalborgensis^Ts Andersen et al., 2019 (valid 2024)

Effective publication

Andersen et al., 2019

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:sy5jeiw2 (validated)

Canonical URL

https://seqco.de/i:320

Nomenclature

Rank

Species

Syllabication

a.al.bor.gen'sis

Etymology

N.L. fem. adj. aalborgensis, Pertaining to Aalborg, a city in the Jutland region of Denmark

Nomenclatural type

NCBI Assembly: GCA_900491745.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Filamenous bacteria abundant in activate sludge WWTPs worldwide, where it was shown to contribute to sever bulking problems. This taxon is capable of aerobic respiration, fermentation, and has a potential to perform dissimilatory nitrate reduction to ammonia as well as glycogen synthesis and degradation. The filaments are in the 20 - 140 µm range for length and 1.0 - 2.2 µm for thickness.

Classification

Bacteria » Chloroflexota » Anaerolineae » “Amarolineales” » Amarolineaceae » Amarolinea » Amarolinea aalborgensis^Ts

Parent

Amarolinea assigned in Andersen et al., 2019

Genomics

Accession

NCBI Assembly:GCA_900491745.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 95.5%
• Contamination: 1.1%
• Quality: 90.0

Ribosomal and transfer RNA genes

• 1 16S rRNA (up to 100.0%)
• 1 23S rRNA (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

50.0 ×

Source

• BioSample: SAMEA4730918

Other features

• G+C Content: 62.0%
• Coding Density: 88.38%
• Codon Table: 11
• N50: 252,621 bp
• Contigs: 80
• Largest Contig: 652,831 bp
• Assembly Length: 5,723,216 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified 10 days ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_900491745.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Amarolinea aalborgensis (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 7 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Nielsen, Per H. 7 months ago

Submitted by

Nielsen, Per H. 7 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 7 months ago

Date of priority

2024-04-24 10:02 AM (UTC)