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Methanocatella gottschalkii

Citation

Formal styling
Methanocatella gottschalkii Protasov et al., 2023 (priority 2024)
Effective publication
Protasov et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hfttq0ec (validated)
Canonical URL
https://seqco.de/i:32434

Nomenclature

Rank
Species
Syllabication
gott.schalk'i.i
Etymology
N.L. gen. masc. n. gottschalkii, of Gottschalk, named in honor of Gerhard Gottschalk for his notable contributions to the understanding of the biochemistry of methanogenesis
Nomenclatural type
NCBI Assembly: GCF_003814835.1
Reference strain
Strain sc|0040524: HO = ATCC BAA-1169 = DSM 11977 Lookup StrainInfo
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Coccobacillus with rounded ends, about 0.7 µm in width and 0.9 µm in length, occurring in pairs or short chains. Gram-positive reaction. Cell walls are composed of pseudomurein. Cells are resistant to lysis by SDS. Optimum temperature 37 °C. Optimum pH 7 (as in Miller, Lin, 2002). The G+C content of the type genome is 30.0 mol%, and the genome size is 1.87 Mbp. 
Classification
Archaea » Methanobacteriota » Methanobacteria » Methanobacteriales » Methanobacteriaceae » Methanocatella » Methanocatella gottschalkii
Parent
Methanocatella gtdb
Alternative placements

Genomics

Accession
NCBI Assembly:GCF_003814835.1
Cultures
Strain sc|0040524
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
724.0 ×
Source
Other features
  • G+C Content: 30.02%
  • Coding Density: 87.58%
  • Codon Table: 11
  • N50: 595,922 bp
  • Contigs: 6
  • Largest Contig: 728,892 bp
  • Assembly Length: 1,878,029 bp
  • Ambiguous Assembly Fraction: 0.0055%
Submitter comments
Methanobrevibacter gottschalkii
Automated checks
Complete
See additional details
Last modified 16 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 2 years ago by Protasov, Evgenii
Submitted
Over 1 year ago by Protasov, Evgenii
Curators
Validated
Over 1 year ago by Rodriguez-R, Luis M
Date of priority
2024-04-16 06:48 PM (UTC)

Publications
2

Citation Title
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Effective publication
Miller, Lin, 2002, International Journal of Systematic and Evolutionary Microbiology Description of Methanobrevibacter gottschalkii sp. nov., Methanobrevibacter thaueri sp. nov., Methanobrevibacter woesei sp. nov. and Methanobrevibacter wolinii sp. nov.


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seqco.de/r:hfttq0ec