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Methanoplasma reticulitermitis

Citation

Formal styling
Methanoplasma reticulitermitis Protasov et al., 2023 (priority 2024)
Effective publication
Protasov et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:hfttq0ec (validated)
Canonical URL
https://seqco.de/i:32529

Nomenclature

Rank
Species
Syllabication
re.ti.cu.li.ter'mi.tis
Etymology
N.L. gen. n. reticulitermitis, referring to Reticulitermes, the host genus
Nomenclatural type
NCBI Assembly: GCA_031287135.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The species identified by metagenomic analyses. The G+C content of the type genome is 53.4%, and the estimated genome size is 1.34 Mbp.
Classification
Archaea » Methanobacteriota » Thermoplasmata » Methanomassiliicoccales » Methanomethylophilaceae » Methanoplasma » Methanoplasma reticulitermitis
Parent
Methanoplasma gtdb

Genomics

Accession
NCBI Assembly:GCA_031287135.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.0%
  • Contamination: 0.0%
  • Quality: 91.0
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 51.0%)
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Sequencing depth
91.0 ×
Source
Other features
  • G+C Content: 53.5%
  • Coding Density: 91.0%
  • Codon Table: 11
  • N50: 12,197 bp
  • Contigs: 118
  • Largest Contig: 42,085 bp
  • Assembly Length: 1,219,661 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 6 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 2 years ago by Protasov, Evgenii
Submitted
Over 1 year ago by Protasov, Evgenii
Curators
Validated
Over 1 year ago by Rodriguez-R, Luis M
Date of priority
2024-04-16 06:48 PM (UTC)

Publications
1

Citation Title
Protasov et al., 2023, Frontiers in Microbiology Diversity and taxonomic revision of methanogens and other archaea in the intestinal tract of terrestrial arthropods
Effective publication


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seqco.de/r:hfttq0ec