Taurinivorans murisTs


Citation

Formal styling
Taurinivorans murisTs Ye et al., 2023 (valid 2024)
Effective publication
Ye et al., 2023
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:pzblpla3 (validated)
Canonical URL
https://seqco.de/i:32703

Nomenclature

Rank
Species
Syllabication
mu'ris
Etymology
L. gen. n. muris, of a mouse, referring to its origin from the mouse intestine
Nomenclatural type
NCBI Assembly: GCA_025232395.1
Reference strain
LT0009 = DSM 111569 = JCM 34262
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Taurinivorans muris sp. nov. (mu'ris. L. gen. n. muris, of a mouse, referring to its origin from the mouse intestine). The type strain is strain LT0009 (= DSM 111569 = JCM 34262), isolated from the mouse gut with taurine as the electron acceptor and lactate/pyruvate as electron donors. Formate was also used as an electron donor for taurine respiration.Cells are Gram-stain-negative, spirilloid in shape, and motile by means of lophotrichous polar flagella. The temperature range is 27-42°C and the optimum pH is 6.5 (range 6-8.5) for strictly anaerobic growth. The optimal taurine concentration for growth is 40 mmol/l, higher taurine concentrations inhibit growth. Sulfolactate and thiosulfate are additional electron acceptors for anaerobic respiration and are also reduced to hydrogen sulfide. Yeast extract and 1,4-naphthoquinone are required as growth supplements for laboratory cultivation of the isolate. Its genome size is 2.2 Mbp with a G+C content of 43.6%. The GenBank accession numbers for the genome and the 16S rRNA gene sequence of strain LT0009T are CP065938 and MW258658, respectively.
Classification
Bacteria » Desulfobacterota » Desulfovibrionia » Desulfovibrionales » Desulfovibrionaceae » Taurinivorans » Taurinivorans murisTs
Parent
Taurinivorans ncbigtdb

Genomics

Accession
NCBI Assembly:GCA_025232395.1
Type
Isolate Genome
Estimated Quality Metrics
  • Completeness: 100.0%
  • Contamination: 0.0%
  • Quality: 100.0
Ribosomal and transfer RNA genes
  • 4 16S rRNAs (up to 100.0%)
  • 4 23S rRNAs (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
30.0 ×
Source
Other features
  • G+C Content: 43.6%
  • Coding Density: 89.13%
  • Codon Table: 11
  • N50: 2,172,708 bp
  • Contigs: 1
  • Largest Contig: 2,172,708 bp
  • Assembly Length: 2,172,708 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details

Last modified 10 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Loy, Alexander about 1 year ago
Submitted by
Loy, Alexander 11 months ago
Curators
Endorsed by
Palmer, Marike 10 months ago
Validated by
Palmer, Marike 10 months ago
Date of priority
2024-01-11 02:56 PM (UTC)

Publications
1

Citation Title
Ye et al., 2023, Nature Communications Ecophysiology and interactions of a taurine-respiring bacterium in the mouse gut
Effective publication



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