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Sysuimicrobium calidumTs

Citation

Formal styling
Sysuimicrobium calidumTs Liu et al., 2024
Effective publication
Liu et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:kojsr2qc (validated)
Canonical URL
https://seqco.de/i:32787

Nomenclature

Rank
Species
Syllabication
ca'li.dum
Etymology
L. neut. adj. calidum, indicating the origin of the metagenome from hot spring
Nomenclatural type
NCBI Assembly: GCA_031459935.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A species established on the basis of AAI, ANI, dDDH and phylogenomic analyses, and is classified as a member of the Sysuimicrobium genus.
Classification
Bacteria » Sysuimicrobiota » Sysuimicrobiia » Sysuimicrobiales » Sysuimicrobiaceae » Sysuimicrobium » Sysuimicrobium calidumTs
Parent
Sysuimicrobium

Genomics

Accession
NCBI Assembly:GCA_031459935.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.67%
  • Contamination: 1.85%
  • Quality: 82.42
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 68.74%
  • Coding Density: 94.88%
  • Codon Table: 11
  • N50: 44,353 bp
  • Contigs: 73
  • Largest Contig: 177,143 bp
  • Assembly Length: 2,141,302 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered by
Liu, Lan about 1 year ago
Submitted by
Liu, Lan 5 months ago
Curators
Endorsed by
Valero Tebar, Juan 5 months ago
Validated by
Rodriguez-R, Luis M 7 days ago
Date of priority
2024-10-28 04:01 AM (UTC)

Publications
1

Citation Title
Liu et al., 2024, National Science Review Insights into chemoautotrophic traits of a prevalent bacterial phylum CSP1-3, herein Sysuimicrobiota
Effective publication


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