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Sysuimicrobium calidumTs

This name contravenes at least one rule from the SeqCode, and it's at risk of being rejected:
  • Name missing in effective publication: The reported effective publication does not mention this name

Citation

Formal styling
Sysuimicrobium calidumTs Liu et al., 2024
Effective publication
Liu et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:kojsr2qc (validated)
Canonical URL
https://seqco.de/i:32787

Nomenclature

Rank
Species
Syllabication
ca'li.dum
Etymology
L. neut. adj. calidum, indicating the origin of the metagenome from hot spring
Nomenclatural type
NCBI Assembly: GCA_031459935.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A species established on the basis of AAI, ANI, dDDH and phylogenomic analyses, and is classified as a member of the Sysuimicrobium genus.
Classification
Bacteria » Sysuimicrobiota » Sysuimicrobiia » Sysuimicrobiales » Sysuimicrobiaceae » Sysuimicrobium » Sysuimicrobium calidumTs
Parent
Sysuimicrobium gtdb

Genomics

Accession
NCBI Assembly:GCA_031459935.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.67%
  • Contamination: 1.85%
  • Quality: 82.42
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 68.74%
  • Coding Density: 94.88%
  • Codon Table: 11
  • N50: 44,353 bp
  • Contigs: 73
  • Largest Contig: 177,143 bp
  • Assembly Length: 2,141,302 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 7 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Almost 3 years ago by Liu, Lan
Submitted
About 2 years ago by Liu, Lan
Curators
Endorsed
About 2 years ago by Valero Tebar, Juan
Validated
Over 1 year ago by Rodriguez-R, Luis M
Date of priority
2024-10-28 04:01 AM (UTC)

Publications
1

Citation Title
Liu et al., 2024, National Science Review Insights into chemoautotrophic traits of a prevalent bacterial phylum CSP1-3, herein Sysuimicrobiota
Effective publication


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seqco.de/r:kojsr2qc