JSONPDF

Humicultor tengchongensisTs

This name contravenes at least one rule from the SeqCode, and it's at risk of being rejected:
  • Name missing in effective publication: The reported effective publication does not mention this name

Citation

Formal styling
Humicultor tengchongensisTs Liu et al., 2024
Effective publication
Liu et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:kojsr2qc (validated)
Canonical URL
https://seqco.de/i:32811

Nomenclature

Rank
Species
Syllabication
teng.chong.en'sis
Etymology
N.L. masc. adj. tengchongensis, pertaining to Tengchong, the source of the metagenomic sample
Nomenclatural type
INSDC Nucleotide: JAVKIA000000000
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
A species established on the basis of AAI, ANI, dDDH and phylogenomic analyses, and is classified as a member of the Humicultor genus.
Classification
Bacteria » Sysuimicrobiota » Sysuimicrobiia » Sysuimicrobiales » Humicultoraceae » Humicultor » Humicultor tengchongensisTs
Parent
Humicultor gtdb

Genomics

Accession
INSDC Nucleotide:JAVKIA000000000
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 90.43%
  • Contamination: 0.93%
  • Quality: 85.78
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 43.0%)
  • tRNAs for 21 amino acids
Sequencing depth
100.0 ×
Source
Other features
  • G+C Content: 69.39%
  • Coding Density: 92.18%
  • Codon Table: 11
  • N50: 67,768 bp
  • Contigs: 75
  • Largest Contig: 213,826 bp
  • Assembly Length: 2,761,254 bp
  • Ambiguous Assembly Fraction: 0.0018%
Automated checks
Complete
See additional details
Last modified 17 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Almost 3 years ago by Liu, Lan
Submitted
About 2 years ago by Liu, Lan
Curators
Endorsed
About 2 years ago by Valero Tebar, Juan
Validated
Over 1 year ago by Rodriguez-R, Luis M
Date of priority
2024-10-28 04:01 AM (UTC)

Publications
1

Citation Title
Liu et al., 2024, National Science Review Insights into chemoautotrophic traits of a prevalent bacterial phylum CSP1-3, herein Sysuimicrobiota
Effective publication


© 2022-2026 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license
seqco.de/r:kojsr2qc