Aadella gelida^Ts

Citation

Formal styling

Aadella gelida^Ts Williams et al., 2021 (valid 2024)

Effective publication

Williams et al., 2021

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:2rggbgyb (validated)

Canonical URL

https://seqco.de/i:33273

Nomenclature

Rank

Species

Syllabication

ge.li'da

Etymology

L. fem. adj. gelida, ice-cold; in reference to the very cold temperature of Ace Lake.

Nomenclatural type

NCBI Assembly: GCA_030765205.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

This species is the type for the genus Aadella. The description for this species is derived from Williams et al., 2021, and supplemented with additional information. Genome predictions designate this species as heterotrophic and capable of fermentation of glucose to acetyl-CoA through the EMP pathway. Proteases and peptidases for the degradation of proteins to amino acids is also encoded within the genome. Additionally, simple sugar transport and glycoside hydrolases are encoded by the genome and genes required for the synthesis of trehalose and glycogen are also present. The genome representative of this species encodes a V-type ATPase and an Rnf complex for ATP synthesis, and a Group 3b [NiFe] hydrogenase has been reported for this species. All components for a Type-4a pilus is encoded by the genome. The nomenclatural type for the species is the genome designated 3300035698_848.

Classification

Bacteria » Omnitrophota » “Gorgyraia” » “Tantalellales” » “Tantalellaceae” » Aadella » Aadella gelida^Ts

Parent

Aadella gtdb

Genomics

Accession

NCBI Assembly:GCA_030765205.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 93.52%
• Contamination: 0.17%
• Quality: 92.67

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 0 23S rRNAs
• tRNAs for 21 amino acids

Sequencing depth

70.0 ×

Source

• BioSample: SAMN34002231
• And 100 more…

Other features

• G+C Content: 40.5%
• Coding Density: 89.11%
• Codon Table: 11
• N50: 24,424 bp
• Contigs: 113
• Largest Contig: 69,385 bp
• Assembly Length: 1,592,514 bp
• Ambiguous Assembly Fraction: 0.0%

Submitter comments

IMG Annotation pipeline
CheckM1 values as reported in 10.3389/fmicb.2021.741077
CheckM2 values as reported in 10.1038/s41564-022-01319-1

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_030765205.1
• GTDB Tree: s__Aadella gelida
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Aadella gelida (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 2 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Allen, Michelle about 1 year ago

Submitted by

Allen, Michelle 4 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Palmer, Marike 2 months ago

Date of priority

2024-09-04 06:09 AM (UTC)