JSONPDF

Candidatus Bacteroides periocalifornicus

This name was automatically created through literature mining, and it currently has no standing or validity.
Authors of original publications are encouraged to claim the name and submit it for validation
Login or Signup to claim this name.

Citation

Formal styling
“Candidatus Bacteroides periocalifornicus” McLean et al., 2015
Effective publication
McLean et al., 2015
SeqCode status
Automated discovery
Canonical URL
https://seqco.de/i:434

Nomenclature

Rank
Species
Etymology
periocalifornicus
Nomenclatural type
Genome sc|0006477 Ts

Taxonomy

Classification
Bacteria » Bacteroidota » Bacteroidia » Bacteroidales » Bacteroidaceae » Bacteroides » Candidatus Bacteroides periocalifornicus
Parent
Bacteroides

Genomics

Accession
NCBI Assembly: GCA_001421095.1 [NCBI | EMBL]
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.3%
  • Contamination: 5.7%
  • Quality: 65.8
Ribosomal and transfer RNA genes
  • 0 16S rRNAs
  • 0 23S rRNAs
  • tRNAs for 19 amino acids
Source
Other features
  • G+C Content: 55.82%
  • Coding Density: 85.49%
  • Codon Table: 11
  • N50: 46,708 bp
  • Contigs: 119
  • Largest Contig: 129,525 bp
  • Assembly Length: 2,516,425 bp
  • Ambiguous Assembly Fraction: 0.0057%
Automated checks
Complete
See additional details
Last modified 2 days ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 7 years ago by Excubia bot

Publications
1

Citation Title
McLean et al., 2015, Genome Announcements Draft Genome Sequence of “ Candidatus Bacteroides periocalifornicus,” a New Member of the Bacteriodetes Phylum Found within the Oral Microbiome of Periodontitis Patients
Effective publication


© 2022-2026 The SeqCode Initiative
  All information contributed to the SeqCode Registry is released under the terms of the Creative Commons Attribution (CC BY) 4.0 license