Flexifilum breve^Ts

Citation

Formal styling

Flexifilum breve^Ts Petriglieri et al., 2023 (valid 2024)

Effective publication

Petriglieri et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:82uy5hy3 (validated)

Canonical URL

https://seqco.de/i:43998

Nomenclature

Rank

Species

Syllabication

bre've

Etymology

L. neut. adj. breve, short

Nomenclatural type

NCBI Assembly: GCA_016717205.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

The species is established on the same basis as the genus and the type material is the genome Ribe_BATAC.253. Fluorescence in situ hybridization with genus-specific FISH probes shows filamentous morphology (>100 × 0.8-1.1 µm).

Classification

Bacteria » Chloroflexota » Anaerolineae » Aggregatilineales » Flexifilaceae » Flexifilum » Flexifilum breve^Ts

Parent

Flexifilum gtdb assigned in Petriglieri et al., 2023

Genomics

Accession

NCBI Assembly:GCA_016717205.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 96.36%
• Contamination: 0.91%
• Quality: 91.81

Ribosomal and transfer RNA genes

• 3 16S rRNAs (up to 100.0%)
• 3 23S rRNAs (up to 100.0%)
• tRNAs for 20 amino acids

Sequencing depth

12.0 ×

Source

• BioSample: SAMN16426433
• BioSample: SAMN14825723

Other features

• G+C Content: 59.58%
• Coding Density: 88.95%
• Codon Table: 11
• N50: 664,729 bp
• Contigs: 20
• Largest Contig: 1,512,566 bp
• Assembly Length: 7,801,835 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_016717205.1
• GTDB Tree: s__Flexifilum breve
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Flexifilum breve (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 6 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Petriglieri, Francesca 10 months ago

Submitted by

Petriglieri, Francesca 8 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M 6 months ago

Date of priority

2024-04-26 11:27 AM (UTC)