Kouleothrix ribensis^Ts

Citation

Formal styling

Kouleothrix ribensis^Ts Petriglieri et al., 2023 (valid 2024)

Effective publication

Petriglieri et al., 2023

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:82uy5hy3 (validated)

Canonical URL

https://seqco.de/i:44008

Nomenclature

Rank

Species

Syllabication

ri.ben'sis

Etymology

N.L. fem. adj. ribensis, pertinent to the city of Ribe

Nomenclatural type

NCBI Assembly: GCA_016722075.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

A species of filamentous bacteria abundant in activated sludge, established on the basis of MiGA taxonomic novelty analyses, ANI, 16S rRNA gene phylogenetic reconstruction and phylogenomic analyses

Classification

Bacteria » Chloroflexota » Chloroflexia » Chloroflexales » Roseiflexaceae » Kouleothrix » Kouleothrix ribensis^Ts

Parent

Kouleothrix gtdb

Genomics

Accession

NCBI Assembly:GCA_016722075.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 99.21%
• Contamination: 2.08%
• Quality: 88.81

Ribosomal and transfer RNA genes

• 2 16S rRNAs (up to 100.0%)
• 2 23S rRNAs (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

34.0 ×

Source

• BioSample: SAMN16426455
• BioSample: SAMN14825723

Other features

• G+C Content: 64.99%
• Coding Density: 84.83%
• Codon Table: 11
• N50: 5,636,499 bp
• Contigs: 4
• Largest Contig: 5,636,499 bp
• Assembly Length: 7,093,236 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_016722075.1
• GTDB Tree: s__Kouleothrix ribensis
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Kouleothrix ribensis (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 6 months ago
• Submission process status
• Quality checks before valid publication

Registered by

Petriglieri, Francesca 10 months ago

Submitted by

Petriglieri, Francesca 8 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)
• Valero Tebar, Juan

Validated by

Rodriguez-R, Luis M 6 months ago

Date of priority

2024-04-26 11:27 AM (UTC)