Bifidobacterium hominis


Citation

Formal styling
Bifidobacterium hominis Hitch et al. 2025
Effective publication
Hitch et al., 2025
SeqCode status
Valid (ICNP)
Canonical URL
https://seqco.de/i:48042

Nomenclature

Rank
Species
Syllabication
ho'mi.nis
Etymology
L. gen. n. hominis, of a human being, pertaining to the human gut habitat, from where the type strain was isolated
Nomenclatural type
Strain sc|0040852: CLA AA-H311 = DSM 118068 = LMG 33596 (Cat. ) Lookup StrainInfo
Nomenclatural status
Validly published under the ICNP

Taxonomy

Description
The genome size is 2.03 Mbp, G+C percentage is 55.98%, with 99.77% completeness and 0.45% contamination. The closest relative to strain CLA-AA-H311 was Bifidobacterium pseudocatenulatum (99.07%) based on 16S rRNA gene analysis. However, ANI comparison identified strain CLA-AA-H311 as a novel species within the genus Bifidobacterium, with an ANI value of 93.18% against the closest relative B. pseudocatenulatum. GTDB-Tk classification as ‘Bifidobacterium sp002742445’ confirmed the proposition of a novel species. Placement within the genus Bifidobacterium was confirmed by the presence of fructose-6-phosphate phosphoketolase (KO1621). Functional analysis showed the strain has 90 transporters, 20 secretion genes, and predicted utilization of starch and production of propionate, acetate, and folate. In total, 137 CAZymes were identified, with 28 different glycoside hydrolase families and 11 glycoside transferase families represented. The strain CLA-AA-H311 (phylum Actinomycetota, family Bifidobacteriaceae) was isolated from human faeces.
Classification
Bacteria » Actinomycetota » Actinomycetes » Bifidobacteriales » Bifidobacteriaceae » Bifidobacterium » Bifidobacterium hominis
Parent
Bifidobacterium ncbigtdb
Taxonomic status
Correct name, recommended for medical use

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 1 year ago by Masson, Johannes
Submitted
9 months ago by Masson, Johannes
Curators

Publications
1

Citation Title
Hitch et al., 2025, Nature Communications HiBC: a publicly available collection of bacterial strains isolated from the human gut
Effective publication



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