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Pseudoflavonifractor intestinihominis

Citation

Formal styling
Pseudoflavonifractor intestinihominis Hitch et al. 2025
Effective publication
Hitch et al., 2025
SeqCode status
Valid (ICNP)
Canonical URL
https://seqco.de/i:48065

Nomenclature

Rank
Species
Syllabication
in.tes.ti.ni.ho.mi'nis
Etymology
L. neut. n. intestinum, the intestine; L. masc. n. homo, a human beeing; N.L. gen. n. intestinihominis, of the human gut
Nomenclatural type
Strain sc|0041349: CLA AP-H29 = DSM 118073 = LMG 33601 (Cat. ) Lookup StrainInfo
Nomenclatural status
Validly published under the ICNP

Taxonomy

Description
The genome size is 3.69 Mbp, G+C percentage is 61.54%, with 99.33% completeness and 0.0% contamination. Strain CLA-AP-H29 was assigned to the species Pseudoflavonifractor capillosus (99.53%) based on 16S rRNA gene sequence analysis. However, ANI suggested the isolate represents a novel species as comparison to P. capillosus gave a value of 80.96%. GTDB-Tk classified strain CLA-AP-H29 as ‘Pseudoflavonifractor sp944387275’, which confirms that it represents a novel species. Functional analysis predicted the strain has 121 transporters, 14 secretion genes, and predicted utilization of starch, and production of L-glutamate, folate, and cobalamin. In total, 180 CAZymes were identified, with 25 different glycoside hydrolase families and 15 glycoside transferase families represented. The strain CLA-AP-H29 (phylum Bacillota, family Oscillospiraceae) was isolated from human faeces.
Classification
Bacteria » Bacillota » Clostridia » Eubacteriales » Ocillospiraceae » Pseudoflavonifractor » Pseudoflavonifractor intestinihominis
Parent
Pseudoflavonifractor ncbigtdb
Taxonomic status
Correct name, recommended for medical use

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 1 year ago by Masson, Johannes
Submitted
10 months ago by Masson, Johannes
Curators

Publications
1

Citation Title
Hitch et al., 2025, Nature Communications HiBC: a publicly available collection of bacterial strains isolated from the human gut
Effective publication


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