Ruthenibacterium intestinale


Citation

Formal styling
Ruthenibacterium intestinale Hitch et al. 2025
Effective publication
Hitch et al., 2025
SeqCode status
Valid (ICNP)
Canonical URL
https://seqco.de/i:48068

Nomenclature

Rank
Species
Syllabication
in.tes.ti.na'le
Etymology
N.L. neut. adj. intestinale, pertaining to the intestine, from where the type strain was isolated
Nomenclatural type
Strain sc|0041418: CLA JM-H11 = DSM 114604 = LMG 33032 (Cat. ) Lookup StrainInfo
Nomenclatural status
Validly published under the ICNP

Taxonomy

Description
The genome size is 3.1 Mbp, G+C percentage is 54.69%, with 98.3% completeness and 0.0% contamination. It contains a plasmid (5,063 bp). The closest relative to strain CLA-JM-H11 is Ruthenibacterium lactatiformans (94.93%), the type species of this genus, based on 16S rRNA gene analysis. Placement of the isolate within the genus Ruthenibacterium was confirmed based on POCP comparison, with a value of 56.41% to the type species. Strain CLA-JM-H11 was confirmed to be distinct to R. lactatiformans based on ANI comparison (79.28%). GTDB-Tk classification confirmed this assignment as an unknown species within Ruthenibacterium. Functional analysis showed the strain has 143 transporters, 16 secretion genes, and predicted utilization of starch, and production of acetate, propionate, folate, and cobalamin. In total, 155 CAZymes were identified, with 27 different glycoside hydrolase families and 13 glycoside transferase families represented. The strain CLA-JM-H11 (phylum Bacillota, family Oscillospiraceae) was isolated from human faeces.
Classification
Bacteria » Bacillota » Clostridia » Eubacteriales » Oscillospiraceae » Ruthenibacterium » Ruthenibacterium intestinale
Parent
Ruthenibacterium ncbigtdb
Taxonomic status
Correct name

Metadata

Outside links and data sources
Search sequences
Local history
Registered
Over 1 year ago by Masson, Johannes
Submitted
10 months ago by Masson, Johannes
Curators

Publications
1

Citation Title
Hitch et al., 2025, Nature Communications HiBC: a publicly available collection of bacterial strains isolated from the human gut
Effective publication



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