Freyarchaeum deiterraeTs


Citation

Formal styling
Freyarchaeum deiterraeTs Valentin-Alvarado et al., 2024
Effective publication
Valentin-Alvarado et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:igzul8qd (validated)
Canonical URL
https://seqco.de/i:48238

Nomenclature

Rank
Species
Syllabication
de.i.ter'rae
Etymology
L. fem. n. dea, deity; L. fem. n. terra, of the earth; N.L. gen. n. deiterrae, of an Earth diety
Nomenclatural type
NCBI Assembly: GCA_037305845.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Freyarchaeum deiteterre has a genome size of about 3.58 Mbp with an average GC% of 40.7%, recovered from California soil. Freyarchaeum 16S shares less than 45%  similarity with previously described Asgardarchaeota classes. F. deiteterre is an acetogenic chemoheterotroph like other Asgardarchaeota, including other soil-associated Atabeyarchaeia. Estimated completeness at 98.13%, contamination at 4.21%, and the presence of 16 S rRNA genes (1264 bp) and 38 tRNAs.
Classification
Archaea » Asgardarchaeota » Freyarchaeia » Freyarchaeales » Freyarchaeaceae » Freyarchaeum » Freyarchaeum deiterraeTs
Parent
Freyarchaeum

Genomics

Accession
NCBI Assembly:GCA_037305845.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 92.3%
  • Contamination: 7.7%
  • Quality: 53.8
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 79.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 16 amino acids
Sequencing depth
23.0 ×
Source
Other features
  • G+C Content: 40.5%
  • Coding Density: 81.85%
  • Codon Table: 11
  • N50: 3,576,204 bp
  • Contigs: 1
  • Largest Contig: 3,576,204 bp
  • Assembly Length: 3,576,204 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
See full comment
Automated checks
Complete
See additional details

Last modified 9 days ago

Metadata

Outside links and data sources
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Local history
Registered by
Valentin-Alvarado, Luis 5 months ago
Submitted by
Valentin-Alvarado, Luis 4 months ago
Curators
Endorsed by
Rodriguez-R, Luis M 4 months ago
Validated by
Palmer, Marike 3 months ago
Date of priority
2024-08-08 08:13 PM (UTC)

Publications
2

Citation Title
Valentin-Alvarado et al., 2024, Nature Communications Asgard archaea modulate potential methanogenesis substrates in wetland soil
Effective publication
Valentin-Alvarado et al., 2023, Asgard archaea modulate potential methanogenesis substrates in wetland soil



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