Amunia macphersoniae^Ts

Citation

Formal styling

Amunia macphersoniae^Ts Montgomery et al., 2021 (valid 2024)

Effective publication

Montgomery et al., 2021

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:acset5a1 (validated)

Canonical URL

https://seqco.de/i:49058

Nomenclature

Rank

Species

Syllabication

mac.pher'so.ni.ae

Etymology

N.L. gen. n. macphersoniae, in honor of Australian Subantarctic voyager and pioneer Hope Macpherson.

Nomenclatural type

NCBI Assembly: GCA_016464795.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Based on phylogenomic analysis of 120 concatenated single copy proteins. MSA was generated with GTDB-Tk v1.3.0 and tree was reconstructed with RaxML v8.2.12.

Classification

Bacteria » Dormibacterota » “Dormibacteria” » Aeolococcales » Aeolococcaceae » Amunia » Amunia macphersoniae^Ts

Parent

Amunia

Genomics

Accession

NCBI Assembly:GCA_016464795.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 91.42%
• Contamination: 0.18%
• Quality: 90.52

Ribosomal and transfer RNA genes

• 0 16S rRNAs
• 1 23S rRNA (up to 31.0%)
• tRNAs for 20 amino acids

Sequencing depth

14.0 ×

Source

• BioSample: SAMN16445487
• BioSample: SAMN16703804

Other features

• G+C Content: 68.5%
• Coding Density: 90.79%
• Codon Table: 11
• N50: 78,503 bp
• Contigs: 72
• Largest Contig: 147,795 bp
• Assembly Length: 2,923,699 bp
• Ambiguous Assembly Fraction: 0.001%

Submitter comments

Completeness estimated with CheckM2

Automated checks

Complete

See additional details

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Last modified about 1 month ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_016464795.1
• Global Biodiversity Information Facility (GBIF)
• Wikispecies: Amunia macphersoniae (see reference source)

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified about 1 month ago
• Submission process status
• Quality checks before valid publication

Registered by

Ferrari, Belinda 3 months ago

Submitted by

Ferrari, Belinda 3 months ago

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated by

Rodriguez-R, Luis M about 1 month ago

Date of priority

2024-10-04 01:30 AM (UTC)