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Dehalobacter alkaniphilus

Citation

Formal styling
Dehalobacter alkaniphilus Bulka et al., 2024
Effective publication
Bulka et al., 2024
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:xu3eopm7 (validated)
Canonical URL
https://seqco.de/i:49180

Nomenclature

Rank
Species
Syllabication
al.ka.ni.phi'lus
Etymology
N.L. masc. n. alkanum, alkane; N.L. masc. adj. philus, loving; N.L. masc. adj. alkaniphilus, alkane-loving
Nomenclatural type
NCBI Assembly: GCA_040500365.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The member of the Dehalobacter genus, Candidatus Dehalobacter alkaniphilus, is a bacterial species identified by metagenomic analyses. These bacteria anaerobically respire chlorinated alkanes through reductive dechlorination using hydrogen as an electron donor.
Classification
Bacteria » Bacillota » Clostridia » Eubacteriales » Peptococcaceae » Dehalobacter » Dehalobacter alkaniphilus
Parent
Dehalobacter

Genomics

Accession
NCBI Assembly:GCA_040500365.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.94%
  • Contamination: 0.77%
  • Quality: 96.09
Ribosomal and transfer RNA genes
  • 3 16S rRNAs (up to 100.0%)
  • 3 23S rRNAs (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
1000.0 ×
Source
Other features
  • G+C Content: 45.0%
  • Coding Density: 86.56%
  • Codon Table: 11
  • N50: 3,331,987 bp
  • Contigs: 1
  • Largest Contig: 3,331,987 bp
  • Assembly Length: 3,331,987 bp
  • Ambiguous Assembly Fraction: 0.0%
Automated checks
Complete
See additional details
Last modified 12 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
About 1 year ago by Bulka, Olivia
Submitted
12 months ago by Bulka, Olivia
Curators
Validated
11 months ago by Palmer, Marike
Date of priority
2024-12-12 07:43 PM (UTC)

Publications
1

Citation Title
Bulka et al., 2024, Microbial Genomics Pangenomic insights into Dehalobacter evolution and acquisition of functional genes for bioremediation
Effective publication


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seqco.de/r:xu3eopm7