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Nitrosobungeria shackeltonensisTs

Citation

Formal styling
Nitrosobungeria shackeltonensisTs Tan et al., 2026
Effective publication
Tan et al., 2026
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:_7w3mg8c (validated)
Canonical URL
https://seqco.de/i:51170

Nomenclature

Rank
Species
Syllabication
shac.kel.ton.en'sis
Etymology
N.L. fem. adj. shackeltonensis, of the Shackelton ice shelf, East Antarctica, where Bunger Hills are located
Nomenclatural type
NCBI Assembly: GCA_965610195.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The type material is the metagenome assembled genome BH-18_THE2 recovered from soil from Bunger Hills, East Antarctica. The MAG consists of 3.6 Mbp in 204 contigs with an estimated completeness of 99.1% and 1.46% contamination, 16S (1472 bp), 23S (2054 bp), and 5S (120 bp) genes, and 46 tRNAs (21 unique: 20 standard plus tRNA-iMet). The GC content of this MAG is 37.8%. Predicted to be an ammonia oxidising archaeon.
Classification
Archaea » Thermoproteota » Nitrososphaeria » Nitrososphaerales » Nitrososphaeraceae » Nitrosobungeria » Nitrosobungeria shackeltonensisTs
Parent
Nitrosobungeria

Genomics

Accession
NCBI Assembly:GCA_965610195.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.1%
  • Contamination: 1.46%
  • Quality: 91.8
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 2 23S rRNAs (up to 63.0%)
  • tRNAs for 20 amino acids
Sequencing depth
36.46 ×
Source
Other features
  • G+C Content: 37.34%
  • Coding Density: 71.87%
  • Codon Table: 11
  • N50: 29,466 bp
  • Contigs: 204
  • Largest Contig: 226,585 bp
  • Assembly Length: 3,640,152 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness estimates calculated with CheckM2 (v1.0.1). rRNA genes obtained with barrnap (v0.9) and Infernal (v1.1.4) with Rfam (v14.10). tRNAs detected with tRNAscan-SE (v2.0.12).
Automated checks
Complete
See additional details
Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
10 months ago and claimed 10 months ago by Vázquez-Campos, Xabier
Submitted
10 months ago by Vázquez-Campos, Xabier
Curators
Endorsed
7 months ago by Palmer, Marike
Validated
4 days ago by Palmer, Marike
Date of priority
2026-02-23 11:19 PM (UTC)

Publications
1

Citation Title
Tan et al., 2026, Communications Earth & Environment Persistent petroleum pollution shifts soil microbial responses in Bunger Hills, East Antarctica
Effective publication


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