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Ventifactibacter hollidayaeTs

Citation

Formal styling
Ventifactibacter hollidayaeTs Tan et al., 2026
Effective publication
Tan et al., 2026
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:_7w3mg8c (validated)
Canonical URL
https://seqco.de/i:51199

Nomenclature

Rank
Species
Syllabication
hol.li.day'ae
Etymology
N.L. gen. n. hollidayae, in honour of Dr Louise Holliday, the first woman to winter in Antarctica for the Australian Antarctic Program serving as medical officer at Davis station
Nomenclatural type
NCBI Assembly: GCA_965610795.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
The type material is the metagenome assembled genome BH-10_BAC5 recovered from soil from Bunger Hills, East Antarctica. The MAG consists of 3.4 Mbp in 46 contigs with an estimated completeness of 99.02% and 1.73% contamination, 16S (1518 bp), 23S (2939 bp), and 5S (115 bp) genes, and 42 tRNAs (21 unique: 20 standard plus tRNA-fMet). The GC content of this MAG is 35.2%. Predicted to be able to reduce nitrite (nitrite reductase (NO-forming) [EC:1.7.2.1]).
Classification
Bacteria » Chlorobiota » Ignavibacteria » “Tepidaquicellales” » Ventifactibacteraceae » Ventifactibacter » Ventifactibacter hollidayaeTs
Parent
Ventifactibacter

Genomics

Accession
NCBI Assembly:GCA_965610795.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 99.02%
  • Contamination: 1.73%
  • Quality: 90.37
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 20 amino acids
Sequencing depth
142.63 ×
Source
Other features
  • G+C Content: 35.16%
  • Coding Density: 87.52%
  • Codon Table: 11
  • N50: 110,946 bp
  • Contigs: 46
  • Largest Contig: 211,376 bp
  • Assembly Length: 3,424,277 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness estimates calculated with CheckM2 (v1.0.1). rRNA genes obtained with barrnap (v0.9) and Infernal (v1.1.4) with Rfam (v14.10). tRNAs detected with tRNAscan-SE (v2.0.12).
Automated checks
Complete
See additional details
Last modified about 1 month ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
10 months ago and claimed 10 months ago by Vázquez-Campos, Xabier
Submitted
10 months ago by Vázquez-Campos, Xabier
Curators
Endorsed
7 months ago by Palmer, Marike
Validated
4 days ago by Palmer, Marike
Date of priority
2026-02-23 11:19 PM (UTC)

Publications
1

Citation Title
Tan et al., 2026, Communications Earth & Environment Persistent petroleum pollution shifts soil microbial responses in Bunger Hills, East Antarctica
Effective publication


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