Nocardioides danicus

Citation

Formal styling

Nocardioides danicus Sereika et al., 2025

Effective publication

Sereika et al., 2025

SeqCode status

Valid (SeqCode)

Register List

seqco.de/r:5pc-9lmc (validated)

Canonical URL

https://seqco.de/i:51579

Nomenclature

Rank

Species

Syllabication

da'ni.cus

Etymology

L. masc. adj. danicus, Danish, referring to a species found in Denmark

Nomenclatural type

NCBI Assembly: GCA_963714475.1

Nomenclatural status

Validly published under the SeqCode

Taxonomy

Description

Species established on the basis of ANI comparisons to GTDB R226

Classification

Bacteria » Actinomycetota » Actinomycetes » Propionibacteriales » Nocardioidaceae » Nocardioides » Nocardioides danicus

Parent

Nocardioides

Genomics

Accession

NCBI Assembly:GCA_963714475.1

Type

Metagenome-Assembled Genome (MAG)

Estimated Quality Metrics

• Completeness: 95.3%
• Contamination: 0.9%
• Quality: 90.8

Ribosomal and transfer RNA genes

• 2 16S rRNAs (up to 100.0%)
• 2 23S rRNAs (up to 100.0%)
• tRNAs for 19 amino acids

Sequencing depth

16.5 ×

Source

• BioSample: SAMEA114263417
• BioSample: SAMEA114810123

Other features

• G+C Content: 72.68%
• Coding Density: 88.21%
• Codon Table: 11
• N50: 1,003,205 bp
• Contigs: 8
• Largest Contig: 1,240,571 bp
• Assembly Length: 3,813,889 bp
• Ambiguous Assembly Fraction: 0.0%

Automated checks

Complete

See additional details

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Last modified 11 months ago

Metadata

Outside links and data sources

• GTDB Genome: GCA_963714475.1
• Wikispecies: Nocardioides danicus

Search sequences

• Seach in NCBI Nucleotide

Local history

• This name was last modified 14 days ago
• Submission process status
• Quality checks before valid publication

Registered

11 months ago and claimed 11 months ago by Sereika, Mantas

Submitted

9 months ago by Sereika, Mantas

Curators

• Rodriguez-R, Luis M (genomics)
• Palmer, Marike (nomenclature)

Validated

14 days ago by Palmer, Marike

Date of priority

2025-10-07 05:27 AM (UTC)