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Akirkebyaba affinisTs

Citation

Formal styling
Akirkebyaba affinisTs Sereika et al., 2025
Effective publication
Sereika et al., 2025
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:kohim6k6 (validated)
Canonical URL
https://seqco.de/i:53934

Nomenclature

Rank
Species
Syllabication
af.fi'nis
Etymology
L. fem. adj. affinis, A species related to but distinct from the existing species
Nomenclatural type
NCBI Assembly: GCA_963740275.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Species established on the basis of ANI comparisons to GTDB R226 and 16S rRNA classifications to Silva 138.2. Formerly "uncultured bacterium" in Silva 138.2. Based on metabolic reconstruction, Akirkebyaba affinis is inferred to encode the rod shape-determining protein MreB and peptidoglycan biosynthesis genes.
Classification
Bacteria » Acidobacteriota » Vicinamibacteria » Vicinamibacterales » Alstediellaceae » Akirkebyaba » Akirkebyaba affinisTs
Parent
Akirkebyaba

Genomics

Accession
NCBI Assembly:GCA_963740275.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 95.98%
  • Contamination: 2.73%
  • Quality: 82.33
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
25.0 ×
Source
Other features
  • G+C Content: 66.81%
  • Coding Density: 88.15%
  • Codon Table: 11
  • N50: 841,867 bp
  • Contigs: 9
  • Largest Contig: 2,222,374 bp
  • Assembly Length: 6,762,564 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimates are by CheckM2
Automated checks
Complete
See additional details
Last modified 9 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
9 months ago and claimed 9 months ago by Sereika, Mantas
Submitted
9 months ago by Sereika, Mantas
Curators
Validated
2 days ago by Palmer, Marike
Date of priority
2025-10-06 05:40 AM (UTC)

Publications
1

Citation Title
Sereika et al., 2025, Nature Microbiology Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats
Effective publication


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