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Steppingicola scandiaeTs

Citation

Formal styling
Steppingicola scandiaeTs corrig. Sereika et al., 2025
Effective publication
Sereika et al., 2025
Corrigendum
In SeqCode Registry from “Steppingicola scandius” (sic)
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:kohim6k6 (validated)
Canonical URL
https://seqco.de/i:54205

Nomenclature

Rank
Species
Syllabication
scan.di'ae
Etymology
N.L. gen. n. scandiae, A species found in Scandinavia
Nomenclatural type
NCBI Assembly: GCA_963722555.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Species established on the basis of ANI comparisons to GTDB R226 and 16S rRNA classifications to Silva 138.2. Based on metabolic reconstruction, Steppingicola scandiae is inferred to encode the rod shape-determining protein MreB and peptidoglycan biosynthesis genes.
Classification
Bacteria » Acidobacteriota » Terriglobia » Steppingicolales » Steppingicolaceae » Steppingicola » Steppingicola scandiaeTs
Parent
Steppingicola
Pseudonyms
  • Steppingicola scandius (Original, corrected name)

Genomics

Accession
NCBI Assembly:GCA_963722555.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 98.15%
  • Contamination: 1.0%
  • Quality: 93.15
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
43.2 ×
Source
Other features
  • G+C Content: 59.91%
  • Coding Density: 82.18%
  • Codon Table: 11
  • N50: 1,521,719 bp
  • Contigs: 7
  • Largest Contig: 2,807,126 bp
  • Assembly Length: 6,867,790 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimates are by CheckM2
Automated checks
Complete
See additional details
Last modified 9 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
10 months ago and claimed 10 months ago by Sereika, Mantas
Submitted
9 months ago by Sereika, Mantas
Curators
Validated
15 days ago by Palmer, Marike
Date of priority
2025-10-06 05:40 AM (UTC)

Publications
1

Citation Title
Sereika et al., 2025, Nature Microbiology Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats
Effective publication


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