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Sommerstediella propinquaTs

Citation

Formal styling
Sommerstediella propinquaTs Sereika et al., 2025
Effective publication
Sereika et al., 2025
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:kohim6k6 (validated)
Canonical URL
https://seqco.de/i:54206

Nomenclature

Rank
Species
Syllabication
pro.pin'qua
Etymology
L. fem. adj. propinqua, A species related to but distinct from the existing species
Nomenclatural type
NCBI Assembly: GCA_963807605.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Species established on the basis of ANI comparisons to GTDB R226 and 16S rRNA classifications to Silva 138.2.
Classification
Archaea » “Bathyarchaeota” » Bathyarchaeia » Sommerstediellales » Sommerstediellaceae » Sommerstediella » Sommerstediella propinquaTs
Parent
Sommerstediella

Genomics

Accession
NCBI Assembly:GCA_963807605.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 94.37%
  • Contamination: 2.47%
  • Quality: 82.02
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 19 amino acids
Sequencing depth
16.2 ×
Source
Other features
  • G+C Content: 47.11%
  • Coding Density: 83.12%
  • Codon Table: 11
  • N50: 732,006 bp
  • Contigs: 5
  • Largest Contig: 1,157,264 bp
  • Assembly Length: 2,653,217 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimates are by CheckM2
Automated checks
Complete
See additional details
Last modified 9 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
10 months ago and claimed 10 months ago by Sereika, Mantas
Submitted
9 months ago by Sereika, Mantas
Curators
Validated
15 days ago by Palmer, Marike
Date of priority
2025-10-06 05:40 AM (UTC)

Publications
1

Citation Title
Sereika et al., 2025, Nature Microbiology Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats
Effective publication


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seqco.de/r:kohim6k6