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Vissingium lacustreTs

Citation

Formal styling
Vissingium lacustreTs Sereika et al., 2025
Effective publication
Sereika et al., 2025
SeqCode status
Valid (SeqCode)
Register List
seqco.de/r:kohim6k6 (validated)
Canonical URL
https://seqco.de/i:54766

Nomenclature

Rank
Species
Syllabication
la.cus'tre
Etymology
L. neut. adj. lacustre, A species found in a lake
Nomenclatural type
NCBI Assembly: GCA_963751305.1
Nomenclatural status
Validly published under the SeqCode

Taxonomy

Description
Species established on the basis of ANI comparisons to GTDB R226 and 16S rRNA classifications to Silva 138.2. Formerly "uncultured forest soil bacterium" in Silva 138.2. Based on metabolic reconstruction, Vissingium lacustre is inferred to encode the rod shape-determining protein MreB and peptidoglycan biosynthesis genes.
Classification
Bacteria » Actinomycetota » Acidimicrobiia » Acidimicrobiales » “Aciditerrimonadaceae” » Vissingium » Vissingium lacustreTs
Parent
Vissingium

Genomics

Accession
NCBI Assembly:GCA_963751305.1
Type
Metagenome-Assembled Genome (MAG)
Estimated Quality Metrics
  • Completeness: 91.55%
  • Contamination: 0.09%
  • Quality: 91.1
Ribosomal and transfer RNA genes
  • 1 16S rRNA (up to 100.0%)
  • 1 23S rRNA (up to 100.0%)
  • tRNAs for 21 amino acids
Sequencing depth
28.1 ×
Source
Other features
  • G+C Content: 66.32%
  • Coding Density: 87.74%
  • Codon Table: 11
  • N50: 788,937 bp
  • Contigs: 6
  • Largest Contig: 869,549 bp
  • Assembly Length: 2,487,530 bp
  • Ambiguous Assembly Fraction: 0.0%
Submitter comments
Completeness and contamination estimates are by CheckM2
Automated checks
Complete
See additional details
Last modified 9 months ago

Metadata

Outside links and data sources
Search sequences
Local history
Registered
10 months ago and claimed 10 months ago by Sereika, Mantas
Submitted
9 months ago by Sereika, Mantas
Curators
Validated
15 days ago by Palmer, Marike
Date of priority
2025-10-06 05:40 AM (UTC)

Publications
1

Citation Title
Sereika et al., 2025, Nature Microbiology Genome-resolved long-read sequencing expands known microbial diversity across terrestrial habitats
Effective publication


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seqco.de/r:kohim6k6